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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904739.1_cds_XP_016454867.1_48849
CDS Infomation

[gene=LOC107779038] [db_xref=GeneID:107779038] [protein=UPF0301 protein TC_0483-like isoform X2] [protein_id=XP_016454867.1] [location=complement(join(1220..1897,2337..2479,5177..5381))] [gbkey=CDS]
Sequence

ATGGATCTTTGGTCTGTACATGTGAAAAACACCAATCTTCTACTAAGAAATTCAATTTGT
GAGAAACCCTTTGTTTCAAATTGGAAGGTGTTTGAGATCAGAGTACCTAAAAGACATACC
TTTTATTCATCTTCTGGTTCTGGGTATCACTCTTTACTTGTTAAAGCTATGGGCAAGAAG
AACTCTGACAACTCCAATTCTTCGGGGAAGGGCCCAGAAGAAGATAGCCTAAAAGGGAGC
AACCCCTCTTCTGGAAACGATAGCTCAAAAAATACTGGTGCACCAAAATCTCATCAGAAG
CCCTTGGACTGGAGGGAATTTCGAGCATCTCTCTACATTCAGGAGCAGGCGGCAACTGCA
GTCTCTGACACTCACAAGCAAGAGGGCACAAGTTTTGGTCCCAAAGCTCTTCCCTTGAAG
TGGGCACATCCGATTTCAGCACCTGAGAATGGCTGTGTTCTTGTTGCCACTGAAAAACTC
GACGGAGTTCGTACTTTTGAAAGAACGGTCGTTCTCCTCCTCAGATCTGGAACCAGGCAC
CCACAAGAGGGTCCATTTGGTGTAGTCATAAACCGCCCACTAGGCAAAAAGATCAAGCAC
ATGAAACCCACTAATCTCGACCTGGCAACGACCTTTGCTGATTGTTCCTTGCACTTTGGC
GGGCCCCTTGAAGCAAGTATGTTTCTTTTAAGATCAGGCGCTAGTTCAGAGCTACCTAGG
TTCGAAGAGGTCATTCCTGGTGTGTGTTTTGGTGCTCGAAACAGTTTGGAAGAAGCATCT
GCATTGGTAAACAAAGGGGTGCTTAAGCCACAAGATTTCAGATTCTTCGTTGGCTATGCG
GGGTGGCAGCTTGACCAGTTGAGGGAAGAGATTGAATCCGGTTATTGGTACGTTGCCTCA
TGCAGTTCAAATCTAATTTTTGCAGGTTCACAAACTTCATCATCAGAGAGTTTGTGGGGA
GAGATATTGCAGTTGATGGGTGGTCAGTATTCCGAGGTAAGTCGGAAGCCTAAACAAGAC
ATATAG

Peptide Sequence

PEP ID

XP_016454867.1
PEP Infomation

PREDICTED: UPF0301 protein TC_0483-like isoform X2 [Nicotiana tabacum]
Sequence

MDLWSVHVKNTNLLLRNSICEKPFVSNWKVFEIRVPKRHTFYSSSGSGYHSLLVKAMGKK
NSDNSNSSGKGPEEDSLKGSNPSSGNDSSKNTGAPKSHQKPLDWREFRASLYIQEQAATA
VSDTHKQEGTSFGPKALPLKWAHPISAPENGCVLVATEKLDGVRTFERTVVLLLRSGTRH
PQEGPFGVVINRPLGKKIKHMKPTNLDLATTFADCSLHFGGPLEASMFLLRSGASSELPR
FEEVIPGVCFGARNSLEEASALVNKGVLKPQDFRFFVGYAGWQLDQLREEIESGYWYVAS
CSSNLIFAGSQTSSSESLWGEILQLMGGQYSEVSRKPKQDI

Transcript Sequence

Gene sequence data has not been registered.